STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W0VU99VQ domain-containing protein. (303 aa)    
Predicted Functional Partners:
A0A1Z5S819
VQ domain-containing protein.
  
   
 0.705
A0A1Z5SAZ3
VQ domain-containing protein.
  
   
 0.650
C5YYT6_SORBI
Uncharacterized protein.
  
 
   0.578
A0A1Z5R899
NAC domain-containing protein.
  
 
   0.573
C5YA01_SORBI
VQ domain-containing protein.
      
 0.573
C5Z212_SORBI
NAC domain-containing protein.
  
 
   0.534
C5YLD9_SORBI
VQ domain-containing protein.
  
 
 
 0.531
A0A1Z5RBX4
Uncharacterized protein.
   
 0.522
C5XK42_SORBI
OVATE domain-containing protein.
  
     0.519
A0A1B6Q935
BURP domain-containing protein.
  
 
   0.518
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.