STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W0VUZ2Gp_dh_N domain-containing protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (222 aa)    
Predicted Functional Partners:
C5Z818_SORBI
Uncharacterized protein.
  
 0.894
C5XQ07_SORBI
Uncharacterized protein.
 
 0.811
C5X695_SORBI
Uncharacterized protein.
 
 0.804
A0A1B6Q6Y7
Uncharacterized protein.
 
 0.794
A0A194YKQ5
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
 0.751
A0A194YMV2
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
 0.751
C5Z0B5_SORBI
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
 0.751
C5X0G8_SORBI
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
 0.742
C5Y0Y1_SORBI
GRAS domain-containing protein; Belongs to the GRAS family.
  
 0.734
C5YEH2_SORBI
GRAS domain-containing protein; Belongs to the GRAS family.
  
 0.734
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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