STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W0VV32Uncharacterized protein. (290 aa)    
Predicted Functional Partners:
A0A1W0VZ66
DUF4408 domain-containing protein.
  
     0.505
A0A1Z5RBB7
Uncharacterized protein.
  
     0.467
A0A1Z5SAS4
Uncharacterized protein.
  
     0.457
C5XUR9_SORBI
Uncharacterized protein.
  
     0.445
A0A1Z5RK81
Uncharacterized protein.
  
     0.440
C5XAQ2_SORBI
PGG domain-containing protein.
  
     0.440
A0A1Z5RGQ0
Uncharacterized protein.
  
     0.438
C5XFR0_SORBI
Uncharacterized protein.
  
     0.436
C5YMG8_SORBI
Uncharacterized protein.
  
     0.431
C5XSZ8_SORBI
Uncharacterized protein.
  
     0.423
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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