STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W0VZ20Uncharacterized protein. (176 aa)    
Predicted Functional Partners:
A0A1B6PRT5
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
   
 
 0.748
A0A1B6QQQ9
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
  
 0.554
A0A1Z5RKL6
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
  
 0.554
C5Z2J6_SORBI
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
  
 0.554
A0A1W0VR07
Uncharacterized protein.
  
 0.521
A0A1B6PQI9
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.520
A0A1Z5REV8
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.520
C5XS38_SORBI
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.520
C5YST8_SORBI
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.520
A0A194YIH8
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
  
 0.513
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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