STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W0W196Uncharacterized protein. (241 aa)    
Predicted Functional Partners:
C5XKE8_SORBI
Uncharacterized protein.
  
 
 0.993
C5Z0W6_SORBI
Uncharacterized protein.
  
 
 0.993
C5WSB5_SORBI
Ribosomal_TL5_C domain-containing protein.
  
 
 0.992
C5XEG8_SORBI
50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.
  
 
 0.992
C5WZW1_SORBI
Ribosomal_L18_c domain-containing protein.
   
 
 0.986
C5X466_SORBI
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
 
 
 0.985
C5XAT5_SORBI
Uncharacterized protein.
  
 
 0.985
C5WZ87_SORBI
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.984
C5Z876_SORBI
KOW domain-containing protein; Belongs to the universal ribosomal protein uL24 family.
   
 
 0.984
C5XV43_SORBI
RIBOSOMAL_L9 domain-containing protein.
  
 
 0.983
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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