STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W0W3Q1Uncharacterized protein. (63 aa)    
Predicted Functional Partners:
A0A1B6QAC7
F-box domain-containing protein.
  
     0.538
A0A1W0W3A3
F-box domain-containing protein.
  
     0.536
C5YCY0_SORBI
Uncharacterized protein.
  
     0.528
C5Z434_SORBI
XH domain-containing protein.
  
     0.528
A0A1B6PKR7
Uncharacterized protein.
  
     0.522
C5YN14_SORBI
Uncharacterized protein.
  
     0.522
A0A1Z5RDT8
Uncharacterized protein.
  
     0.515
C5XAT6_SORBI
Uncharacterized protein.
  
     0.511
C5XEU0_SORBI
Uncharacterized protein.
  
     0.510
A0A1Z5R8T1
F-box domain-containing protein.
  
     0.509
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.