STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W0W4E3Uncharacterized protein; Belongs to the disease resistance NB-LRR family. (993 aa)    
Predicted Functional Partners:
C5YMZ6_SORBI
F-box domain-containing protein.
  
     0.538
A0A1Z5R8W0
F-box domain-containing protein.
  
     0.536
A0A1Z5RLG7
NB-ARC domain-containing protein.
  
     0.533
A0A194YJW1
Uncharacterized protein.
  
     0.530
C5XAQ2_SORBI
PGG domain-containing protein.
  
 
  0.530
A0A1W0VRC5
DUF295 domain-containing protein.
  
     0.527
A0A1Z5RFG3
Uncharacterized protein.
  
     0.527
C5WRZ0_SORBI
F-box domain-containing protein.
  
     0.526
A0A1W0W3K1
Uncharacterized protein.
  
     0.524
A0A194YMK2
F-box domain-containing protein.
  
     0.521
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.