STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W0W4T7Ubiquitin-like domain-containing protein. (139 aa)    
Predicted Functional Partners:
C5Z622_SORBI
Uncharacterized protein.
   
 0.957
C5WV32_SORBI
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
   
 0.950
A0A194YQZ7
Uncharacterized protein.
    
 0.943
C5YLI6_SORBI
Uncharacterized protein.
   
 
 0.943
A0A1B6PLL0
Uncharacterized protein.
    
 0.939
C5XWH2_SORBI
Uncharacterized protein.
    
 0.939
C5XQP0_SORBI
KOW domain-containing protein.
   
 0.926
C5XV41_SORBI
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 
 0.917
C5WZW1_SORBI
Ribosomal_L18_c domain-containing protein.
   
 0.916
C5YM25_SORBI
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 0.916
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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