STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1W0W718Ubiquitin-like domain-containing protein. (103 aa)    
Predicted Functional Partners:
C5Y2L6_SORBI
ThiF domain-containing protein.
   
 0.916
C5XD25_SORBI
SUMO-activating enzyme subunit; Belongs to the ubiquitin-activating E1 family.
   
 0.894
A0A1Z5RES0
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.892
C5WUE8_SORBI
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.892
C5X0V8_SORBI
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.892
C5YEH5_SORBI
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.892
C5YEH6_SORBI
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.892
C5Z8A4_SORBI
SMC_N domain-containing protein.
   
 0.780
A0A194YHE0
SP-RING-type domain-containing protein.
    
 0.728
C5YVJ5_SORBI
SP-RING-type domain-containing protein.
   
 0.727
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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