STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Z5R438LRRNT_2 domain-containing protein. (264 aa)    
Predicted Functional Partners:
C5Y1G2_SORBI
AAI domain-containing protein.
  
 
 0.629
C5Z245_SORBI
AAI domain-containing protein.
  
 
  0.567
C5WSJ6_SORBI
AAI domain-containing protein.
  
 
  0.564
C5YRL0_SORBI
Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.
  
 
 0.561
C5WMU9_SORBI
AAI domain-containing protein.
  
 
  0.560
C5Y1G5_SORBI
AAI domain-containing protein.
  
 
  0.560
A0A1Z5RPU4
AAI domain-containing protein.
  
 
  0.559
C5Y1G7_SORBI
AAI domain-containing protein.
  
 
  0.559
C5Y1G9_SORBI
AAI domain-containing protein.
  
 
  0.557
A0A1B6PBT7
Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.
  
 
 0.555
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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