STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Z5R9D1Uncharacterized protein. (697 aa)    
Predicted Functional Partners:
C5Y5R9_SORBI
LRRNT_2 domain-containing protein.
  
     0.499
A0A194YN13
Uncharacterized protein.
  
     0.495
A0A194YTL2
Uncharacterized protein.
  
     0.493
C5WZI5_SORBI
Ubiquitin-like domain-containing protein.
  
     0.488
A0A1Z5S787
Uncharacterized protein.
  
     0.485
A0A1Z5S630
LRRNT_2 domain-containing protein.
  
     0.483
A0A1Z5R0D8
Uncharacterized protein.
  
     0.482
A0A1Z5RB11
LRRNT_2 domain-containing protein.
  
     0.480
A0A1Z5S5W1
Uncharacterized protein.
  
     0.474
C5Z8Q3_SORBI
LRRNT_2 domain-containing protein.
  
     0.474
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.