STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Z5S5F8Uncharacterized protein. (50 aa)    
Predicted Functional Partners:
C5X9E4_SORBI
Thioredoxin domain-containing protein.
  
 0.975
C5XGE2_SORBI
MoCF_biosynth domain-containing protein.
  
 0.951
A0A1Z5RBG0
Uncharacterized protein.
  
 
 0.897
C5X183_SORBI
Uncharacterized protein.
  
 
 0.897
C5XSV1_SORBI
Uncharacterized protein.
  
 
 0.868
C5Z0R1_SORBI
Uncharacterized protein.
  
 
 0.868
A0A1B6Q4V2
TP_methylase domain-containing protein; Belongs to the precorrin methyltransferase family.
  
  
 0.776
A0A1B6QBE3
Uncharacterized protein.
 
  
 0.698
A0A1Z5S8G3
Uncharacterized protein.
 
  
 0.573
A0A1B6QJM9
Uncharacterized protein.
  
  
 0.571
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
Server load: low (12%) [HD]