STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Z5S7E0F-box domain-containing protein. (991 aa)    
Predicted Functional Partners:
A0A1B6QBY8
Uncharacterized protein.
  
     0.510
C5Y337_SORBI
Uncharacterized protein.
  
     0.510
C5WZT7_SORBI
Nuclear pore protein.
  
     0.489
A0A1Z5SB80
Uncharacterized protein.
  
     0.488
C5XAK3_SORBI
Uncharacterized protein.
  
     0.474
A0A1B6QI16
Uncharacterized protein.
  
     0.459
C5YYS4_SORBI
Uncharacterized protein.
  
     0.456
C5WRY4_SORBI
Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.
  
     0.455
C5YM43_SORBI
PMR5N domain-containing protein.
  
     0.452
A0A1Z5RAB8
Uncharacterized protein.
  
     0.448
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.