STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Z5S7S6Uncharacterized protein. (82 aa)    
Predicted Functional Partners:
C5WWK3_SORBI
COBRA-like protein; Belongs to the COBRA family.
  
  
 0.543
A0A1B6PJX2
Uncharacterized protein.
  
     0.540
A0A1Z5RBA8
NAC domain-containing protein.
  
     0.538
C5YBA7_SORBI
NAC domain-containing protein.
  
     0.536
Sb1068s002010
Endoglucanase.
  
     0.535
A0A1B6P775
Uncharacterized protein.
  
     0.534
C5XEY0_SORBI
NAC domain-containing protein.
  
     0.534
C5Y970_SORBI
Uncharacterized protein.
  
     0.534
A0A1B6P712
NAC domain-containing protein.
  
     0.533
A0A1B6PNZ2
Uncharacterized protein.
  
     0.532
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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