STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Z5S8S0Uncharacterized protein. (281 aa)    
Predicted Functional Partners:
C5X8P0_SORBI
Uncharacterized protein.
  
   
 0.596
C5XZA9_SORBI
Uncharacterized protein.
  
     0.534
C5WZ84_SORBI
Uncharacterized protein.
  
     0.516
C5X270_SORBI
ENTH domain-containing protein.
  
     0.514
C5XWC6_SORBI
Uncharacterized protein.
  
     0.514
C5XXL2_SORBI
Uncharacterized protein.
  
     0.513
C5WQZ7_SORBI
Uncharacterized protein.
  
     0.512
A0A1Z5S8R3
Uncharacterized protein.
  
     0.510
A0A1Z5RGM5
Uncharacterized protein.
  
     0.507
C5XQV5_SORBI
Uncharacterized protein.
  
     0.503
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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