STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5WPK8_SORBIHECT domain-containing protein. (1161 aa)    
Predicted Functional Partners:
A0A1B6P8W2
HECT domain-containing protein.
     
0.649
A0A1B6PJR9
Uncharacterized protein.
     
 0.649
C5YZ27_SORBI
HECT domain-containing protein.
     
0.649
A0A1B6Q5C6
Sde2_N_Ubi domain-containing protein.
    
 0.644
A0A194YN33
HECT domain-containing protein.
     
0.640
A0A1B6PJT3
HECT domain-containing protein.
     
0.640
A0A1Z5RJ25
Xpo1 domain-containing protein.
  
    0.518
C5YA17_SORBI
F-box domain-containing protein.
      
 0.510
C5XPH5_SORBI
Protein arginine methyltransferase NDUFAF7; Arginine methyltransferase involved in the assembly or stability of mitochondrial NADH:ubiquinone oxidoreductase complex (complex I).
      
 0.507
C5X1R2_SORBI
Uncharacterized protein.
      
 0.483
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.