C5WQ47_SORBI protein (Sorghum bicolor) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

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[Homology]

Score

C5WQ47_SORBI

Uncharacterized protein. (164 aa)

Predicted Functional Partners:

C5YAM2_SORBI

0.465

A0A1Z5RI85

0.458

C5WQL9_SORBI

0.454

C5YEN2_SORBI

0.453

A0A1Z5RCQ5

0.420

A0A1B6PRV3

0.414

A0A1B6PPA3

0.407

A0A1B6Q0P0

0.402

A0A1B6QPS1

0.401

A0A1Z5R200

0.400

Your Current Organism:

Sorghum bicolor

NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum

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structured XML interaction data, according to the 'PSI-MI' data standard

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... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1B6PPA3	A0A1B6QPS1	A0A1B6PPA3	A0A1B6QPS1	Uncharacterized protein.	Uncharacterized protein.	0.522
A0A1B6PPA3	A0A1Z5R200	A0A1B6PPA3	A0A1Z5R200	Uncharacterized protein.	Uncharacterized protein.	0.524
A0A1B6PPA3	A0A1Z5RCQ5	A0A1B6PPA3	A0A1Z5RCQ5	Uncharacterized protein.	Uncharacterized protein.	0.419
A0A1B6PPA3	C5WQ47_SORBI	A0A1B6PPA3	C5WQ47	Uncharacterized protein.	Uncharacterized protein.	0.407
A0A1B6PPA3	C5YAM2_SORBI	A0A1B6PPA3	C5YAM2	Uncharacterized protein.	Uncharacterized protein.	0.401
A0A1B6PRV3	A0A1B6Q0P0	A0A1B6PRV3	A0A1B6Q0P0	Uncharacterized protein.	Uncharacterized protein.	0.498
A0A1B6PRV3	C5WQ47_SORBI	A0A1B6PRV3	C5WQ47	Uncharacterized protein.	Uncharacterized protein.	0.414
A0A1B6PRV3	C5WQL9_SORBI	A0A1B6PRV3	C5WQL9	Uncharacterized protein.	Cupin_3 domain-containing protein.	0.500
A0A1B6PRV3	C5YAM2_SORBI	A0A1B6PRV3	C5YAM2	Uncharacterized protein.	Uncharacterized protein.	0.496
A0A1B6Q0P0	A0A1B6PRV3	A0A1B6Q0P0	A0A1B6PRV3	Uncharacterized protein.	Uncharacterized protein.	0.498
A0A1B6Q0P0	A0A1B6QPS1	A0A1B6Q0P0	A0A1B6QPS1	Uncharacterized protein.	Uncharacterized protein.	0.497
A0A1B6Q0P0	A0A1Z5R200	A0A1B6Q0P0	A0A1Z5R200	Uncharacterized protein.	Uncharacterized protein.	0.501
A0A1B6Q0P0	A0A1Z5RI85	A0A1B6Q0P0	A0A1Z5RI85	Uncharacterized protein.	Uncharacterized protein.	0.508
A0A1B6Q0P0	C5WQ47_SORBI	A0A1B6Q0P0	C5WQ47	Uncharacterized protein.	Uncharacterized protein.	0.402
A0A1B6Q0P0	C5WQL9_SORBI	A0A1B6Q0P0	C5WQL9	Uncharacterized protein.	Cupin_3 domain-containing protein.	0.488
A0A1B6Q0P0	C5YAM2_SORBI	A0A1B6Q0P0	C5YAM2	Uncharacterized protein.	Uncharacterized protein.	0.524
A0A1B6QPS1	A0A1B6PPA3	A0A1B6QPS1	A0A1B6PPA3	Uncharacterized protein.	Uncharacterized protein.	0.522
A0A1B6QPS1	A0A1B6Q0P0	A0A1B6QPS1	A0A1B6Q0P0	Uncharacterized protein.	Uncharacterized protein.	0.497
A0A1B6QPS1	A0A1Z5RCQ5	A0A1B6QPS1	A0A1Z5RCQ5	Uncharacterized protein.	Uncharacterized protein.	0.422
A0A1B6QPS1	C5WQ47_SORBI	A0A1B6QPS1	C5WQ47	Uncharacterized protein.	Uncharacterized protein.	0.401

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