STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5WU73_SORBIUncharacterized protein. (367 aa)    
Predicted Functional Partners:
C5Y1H6_SORBI
Uncharacterized protein.
    
 0.634
C5X945_SORBI
Uncharacterized protein.
   
 
 0.605
C5YJ82_SORBI
TPR_REGION domain-containing protein.
     
 0.599
A0A1W0W7D2
RING-type domain-containing protein.
     
 0.584
C5XT33_SORBI
Peroxisomal membrane protein PEX16.
     
 0.582
C5XMT6_SORBI
Uncharacterized protein; Belongs to the TPP enzyme family.
     
 0.579
C5Y150_SORBI
START domain-containing protein.
      
 0.568
C5WZC5_SORBI
Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.551
C5XJI1_SORBI
TPT domain-containing protein.
      
 0.509
C5WQ52_SORBI
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
     
 0.409
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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