STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5WVW1_SORBIAAA domain-containing protein. (339 aa)    
Predicted Functional Partners:
C5YE32_SORBI
AAA domain-containing protein.
  
0.994
C5XTJ5_SORBI
AAA domain-containing protein.
  
0.981
A0A1B6QHJ2
AAA domain-containing protein.
   
0.946
A0A1Z5S8C0
Uncharacterized protein.
   
0.946
C5Y0B5_SORBI
Uncharacterized protein.
   
0.946
C5WR11_SORBI
Uncharacterized protein.
   
 0.922
C5YCJ4_SORBI
Checkpoint protein; Belongs to the HUS1 family.
   
 0.902
C5YST1_SORBI
AAA domain-containing protein.
  
  
 
0.900
A0A1B6QP90
AAA domain-containing protein.
   
0.899
A0A1B6P8E2
DNA primase; Belongs to the eukaryotic-type primase small subunit family.
   
 0.890
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.