STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5X8V4_SORBIProtein kinase domain-containing protein. (772 aa)    
Predicted Functional Partners:
C5Y5G8_SORBI
WD_REPEATS_REGION domain-containing protein.
      
 0.648
C5XDN3_SORBI
Pkinase_Tyr domain-containing protein.
    
 0.640
C5XVW0_SORBI
Tubulin-specific chaperone A; Belongs to the TBCA family.
      
 0.623
A0A1Z5R5C8
Uncharacterized protein.
    
 
 0.617
C5XDD8_SORBI
Uncharacterized protein.
    
 
 0.617
C5XN45_SORBI
Uncharacterized protein.
    
 
 0.617
C5YC42_SORBI
Uncharacterized protein.
    
 
 0.617
C5YNA8_SORBI
7,8-dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
      
 0.617
C5Z079_SORBI
Uncharacterized protein.
    
 
 0.617
Q84YE5_SORBI
Cyclin-dependent kinase-like protein; Belongs to the protein kinase superfamily.
    
 
 0.512
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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