STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5XC51_SORBIPKS_ER domain-containing protein. (360 aa)    
Predicted Functional Partners:
A0A1Z5RMP2
Acetolactate synthase.
  
 
 0.485
C5XMT6_SORBI
Uncharacterized protein; Belongs to the TPP enzyme family.
  
 
 0.485
A0A1W0W881
Uncharacterized protein.
   
 
 0.474
C5WNH9_SORBI
Uncharacterized protein.
   
 
 0.474
C5XP73_SORBI
Uncharacterized protein.
   
 
 0.474
C5YZE5_SORBI
Uncharacterized protein.
   
 
 0.474
C5Z818_SORBI
Uncharacterized protein.
  
  
 0.450
A0A1B6PMH2
PALP domain-containing protein.
  
 
  0.449
C5WN25_SORBI
Threonine dehydratase.
  
 
  0.449
C5XFH7_SORBI
Uncharacterized protein.
  
 
  0.449
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.