STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5XDI7_SORBIUncharacterized protein. (223 aa)    
Predicted Functional Partners:
C5Z6N7_SORBI
Uncharacterized protein.
   
0.978
C5WMQ2_SORBI
Uncharacterized protein.
   
0.921
C5X8I7_SORBI
Uncharacterized protein.
   
0.921
C5XX36_SORBI
Uncharacterized protein.
   
 0.911
C5XQ57_SORBI
Uncharacterized protein; Belongs to the AAA ATPase family.
    
 0.883
C5Z5Q9_SORBI
Uncharacterized protein.
   
 0.862
A0A1B6Q6P2
GLUE N-terminal domain-containing protein.
    
 0.859
C5XHY8_SORBI
Uncharacterized protein.
    
 0.859
A0A1B6QQ14
VPS37 C-terminal domain-containing protein.
    
 0.857
C5XLP9_SORBI
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
 0.850
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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