STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5XGM8_SORBIUncharacterized protein. (77 aa)    
Predicted Functional Partners:
C5YH21_SORBI
PCI domain-containing protein.
   
 0.961
C5Y9M7_SORBI
MPN domain-containing protein.
   
 0.960
C5YIK8_SORBI
PCI domain-containing protein.
   
 0.960
C5XUM4_SORBI
26S proteasome non-ATPase regulatory subunit 2 homolog; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
    
 0.956
C5YX27_SORBI
RPN13_C domain-containing protein.
    
 0.951
C5X6E9_SORBI
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.949
C5XGK3_SORBI
MPN domain-containing protein.
   
 0.941
C5WP38_SORBI
VWFA domain-containing protein.
   
 0.935
C5WR06_SORBI
VWFA domain-containing protein.
   
 0.935
C5XC20_SORBI
PCI domain-containing protein.
    
 
 0.935
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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