STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5XIM8_SORBIUncharacterized protein. (317 aa)    
Predicted Functional Partners:
C5Z818_SORBI
Uncharacterized protein.
  
 0.837
A0A194YT53
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.791
A0A1B6PEL7
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.791
A0A1B6Q2G4
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.791
A0A1B6QMR1
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.791
C5WZG9_SORBI
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.791
C5Z0W6_SORBI
Uncharacterized protein.
    
 
 0.726
C5YCV0_SORBI
ETF domain-containing protein.
  
 0.712
A0A1Z5RKN3
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.705
A0A1Z5R7X6
Uncharacterized protein.
  
 0.694
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.