STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5XIW7_SORBIPectin acetylesterase; Hydrolyzes acetyl esters in homogalacturonan regions of pectin. In type I primary cell wall, galacturonic acid residues of pectin can be acetylated at the O-2 and O-3 positions. Decreasing the degree of acetylation of pectin gels in vitro alters their physical properties; Belongs to the pectinacetylesterase family. (417 aa)    
Predicted Functional Partners:
C5XEJ1_SORBI
Glycosyltransferase; Belongs to the UDP-glycosyltransferase family.
      
 0.650
C5XEJ2_SORBI
Glycosyltransferase; Belongs to the UDP-glycosyltransferase family.
      
 0.650
A0A1B6PML1
Uncharacterized protein.
      
 0.617
C5WW37_SORBI
Uncharacterized protein.
      
 0.617
A0A1B6QI31
Glycosyltransferase; Belongs to the UDP-glycosyltransferase family.
      
 0.612
A0A1Z5R0I2
Uncharacterized protein.
      
 0.612
C5Z0E9_SORBI
Glycosyltransferase; Belongs to the UDP-glycosyltransferase family.
      
 0.612
C5Z0F2_SORBI
Glycosyltransferase; Belongs to the UDP-glycosyltransferase family.
      
 0.612
A0A1B6Q1K0
Uncharacterized protein.
      
 0.611
A0A1B6QPL0
Uncharacterized protein.
      
 0.611
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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