STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5XR76_SORBIUncharacterized protein. (821 aa)    
Predicted Functional Partners:
A0A1B6PHG5
Uncharacterized protein.
  
     0.513
A0A1B6Q2G5
Uncharacterized protein.
  
     0.507
C5YNT3_SORBI
Uncharacterized protein.
  
     0.507
A0A1B6QN40
Uncharacterized protein.
  
     0.505
C5X467_SORBI
Uncharacterized protein.
  
     0.502
A0A1B6P5Q2
Uncharacterized protein.
  
     0.497
C5Y632_SORBI
Uncharacterized protein.
  
     0.486
C5XTL5_SORBI
Uncharacterized protein.
  
     0.480
C5XP18_SORBI
Rab-GAP TBC domain-containing protein.
  
     0.479
A0A1B6Q2R0
Uncharacterized protein.
  
     0.467
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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