STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5XTU6_SORBIUncharacterized protein. (240 aa)    
Predicted Functional Partners:
C5WSU8_SORBI
Uncharacterized protein; Belongs to the peptidase M16 family.
   
  
 0.553
C5XNY3_SORBI
Uncharacterized protein.
  
     0.518
A0A1Z5SA07
CHCH domain-containing protein.
   
  
 0.517
C5WYL3_SORBI
Uncharacterized protein.
  
     0.514
C5Z141_SORBI
L51_S25_CI-B8 domain-containing protein.
      
 0.511
A0A1B6PBU4
ADP,ATP carrier protein.
      
 0.510
A0A1Z5SBR7
XS domain-containing protein.
  
     0.487
A0A1B6PQ50
Uncharacterized protein.
  
     0.485
C5XFK4_SORBI
MRP-S28 domain-containing protein.
  
     0.478
C5Z2T8_SORBI
Uncharacterized protein.
  
     0.477
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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