STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5Y1G5_SORBIAAI domain-containing protein. (122 aa)    
Predicted Functional Partners:
C5WR36_SORBI
Uncharacterized protein.
   
 0.570
A0A1Z5R438
LRRNT_2 domain-containing protein.
  
 
  0.560
A0A1Z5R1D8
Uncharacterized protein.
  
 
  0.555
A0A1W0W2B2
AAI domain-containing protein.
  
 
  0.550
A0A1W0W5Y2
Uncharacterized protein.
  
 
  0.550
C5YLD2_SORBI
AAI domain-containing protein.
  
 
   0.545
A0A1B6Q5D0
Uncharacterized protein.
  
 
   0.544
A0A1Z5R2W4
Uncharacterized protein.
  
 
   0.543
C5YV13_SORBI
AAI domain-containing protein.
  
 
   0.541
C5Z3M2_SORBI
Uncharacterized protein.
  
     0.540
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.