STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5Y9T3_SORBIAldose 1-epimerase; Converts alpha-aldose to the beta-anomer. (369 aa)    
Predicted Functional Partners:
A0A1B6Q873
Bgal_small_N domain-containing protein; Belongs to the glycosyl hydrolase 2 family.
  
 
 0.923
A0A1B6P9P7
Glyco_hydro_35 domain-containing protein.
  
 
 0.667
A0A1B6QBH2
Alpha-galactosidase.
     
 0.650
A0A1B6QBH8
Alpha-galactosidase.
     
 0.650
A0A1W0W3H0
Alpha-galactosidase.
     
 0.650
A0A1W0W482
Alpha-galactosidase.
     
 0.650
A0A1Z5R364
Phosphotransferase.
     
 0.650
C5WXC7_SORBI
Alpha-galactosidase.
     
 0.650
C5WXC8_SORBI
Alpha-galactosidase.
     
 0.650
C5X5L7_SORBI
Alpha-galactosidase.
     
 0.650
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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