STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5YD58_SORBIUncharacterized protein; Belongs to the actin family. (590 aa)    
Predicted Functional Partners:
A0A1B6Q1V0
Uncharacterized protein; Belongs to the actin family.
   
 0.995
C5YDS6_SORBI
YL1_C domain-containing protein.
    
 0.993
C5WMN2_SORBI
Uncharacterized protein; Belongs to the actin family.
    
0.992
A0A194YNG2
RuvB-like helicase; Belongs to the RuvB family.
    
 0.989
C5XP35_SORBI
RuvB-like helicase; Belongs to the RuvB family.
    
 0.989
A0A1Z5S9H1
Uncharacterized protein.
    
 0.981
C5XCF8_SORBI
RuvB-like helicase; Belongs to the RuvB family.
   
 0.980
C5YZ15_SORBI
Uncharacterized protein.
   
 0.973
C5Y176_SORBI
Uncharacterized protein.
    
 0.924
C5YSC7_SORBI
Uncharacterized protein; Belongs to the actin family.
    
 0.912
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.