STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5YD95_SORBIHMA domain-containing protein. (155 aa)    
Predicted Functional Partners:
C5YKK7_SORBI
BURP domain-containing protein.
  
     0.515
C5WYW6_SORBI
Uncharacterized protein.
  
     0.514
A0A1W0W6F5
C2 NT-type domain-containing protein.
  
     0.513
C5XG81_SORBI
Uncharacterized protein.
  
     0.509
C5XPP1_SORBI
Uncharacterized protein.
  
     0.503
C5WSX2_SORBI
Uncharacterized protein.
  
    0.502
C5X9W8_SORBI
BURP domain-containing protein.
  
     0.499
A0A1B6PHA4
FAS1 domain-containing protein.
  
     0.498
C5YZ75_SORBI
Uncharacterized protein.
  
     0.495
C5Y0T1_SORBI
Uncharacterized protein.
  
     0.494
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.