STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5YFV2_SORBIUncharacterized protein; Belongs to the glycosyl hydrolase 17 family. (410 aa)    
Predicted Functional Partners:
C5WMN2_SORBI
Uncharacterized protein; Belongs to the actin family.
    
 0.664
A0A1B6QFW1
SWIB domain-containing protein.
    
 0.660
C5XWG0_SORBI
Uncharacterized protein.
    
 0.603
C5X095_SORBI
Uncharacterized protein.
    
 0.589
C5YZL7_SORBI
Uncharacterized protein.
    
 0.589
C5Y176_SORBI
Uncharacterized protein.
   
 
 0.578
A0A1B6P8H3
Uncharacterized protein.
    
 0.499
A0A1B6Q7F3
Uncharacterized protein.
    
 0.499
C5XJC0_SORBI
Uncharacterized protein.
  
 
 0.415
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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