STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5YJ75_SORBIHATPase_c domain-containing protein. (698 aa)    
Predicted Functional Partners:
C5XEC3_SORBI
Uncharacterized protein.
   
 0.998
C5XQ56_SORBI
Uncharacterized protein.
   
 0.998
A0A194YQ38
Uncharacterized protein.
   
 0.968
C5XSS4_SORBI
Uncharacterized protein.
  
 0.895
C5Z6V0_SORBI
Uncharacterized protein.
  
 0.895
A0A194YRT0
Uncharacterized protein.
   
 0.864
A0A1B6QJ09
CS domain-containing protein.
   
 0.857
A0A1B6QMY3
CS domain-containing protein.
   
 0.857
C5YKA7_SORBI
CS domain-containing protein.
   
 0.857
C5XUJ1_SORBI
Aha1_N domain-containing protein.
   
 
 0.817
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
Server load: low (18%) [HD]
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