STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5YM74_SORBIUncharacterized protein. (486 aa)    
Predicted Functional Partners:
A0A1Z5R0M5
Uncharacterized protein.
   
 0.641
A0A1B6PLL0
Uncharacterized protein.
   
  
 0.640
C5XWH2_SORBI
Uncharacterized protein.
   
  
 0.640
C5XWT3_SORBI
Uncharacterized protein.
  
 0.616
C5YL05_SORBI
Uncharacterized protein.
  
 0.616
A0A1Z5RQI6
PPC domain-containing protein.
     
 0.546
A0A194YTC8
Uncharacterized protein.
  
    0.540
A0A1B6PPV7
DsbD domain-containing protein.
  
    0.538
C5YA06_SORBI
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.522
A0A1Z5RLV8
Uncharacterized protein.
    
 
 0.516
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.