STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5YPJ9_SORBIUncharacterized protein. (674 aa)    
Predicted Functional Partners:
A0A194YSP8
Uncharacterized protein.
  
 
  0.554
A0A1B6QEG4
Bromo domain-containing protein.
  
  
  0.548
C5WU81_SORBI
Uncharacterized protein.
  
 
  0.542
A0A1Z5S6W7
GTD-binding domain-containing protein.
  
  
  0.541
C5XL74_SORBI
C2H2-type domain-containing protein.
  
     0.538
A0A1Z5SA00
Uncharacterized protein.
  
     0.527
Dof6
Dof-type zinc finger protein 6.
  
 
  0.523
A0A1B6Q3A9
Uncharacterized protein.
  
 
  0.521
A0A1B6P8M1
CW-type domain-containing protein.
  
  0.519
A0A1B6P992
DUF569 domain-containing protein.
  
 
   0.518
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.