STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5YU07_SORBIADK_lid domain-containing protein; Belongs to the adenylate kinase family. (241 aa)    
Predicted Functional Partners:
A0A1Z5RE38
Expansin-like EG45 domain-containing protein; Belongs to the expansin family.
   
 0.962
A0A194YR04
PfkB domain-containing protein.
  
 0.931
C5YCD5_SORBI
PfkB domain-containing protein.
  
 0.931
C5X6G2_SORBI
A_deaminase domain-containing protein.
   
 
 0.913
C5YWD0_SORBI
A_deaminase domain-containing protein.
   
 
 0.913
C5WZW6_SORBI
AAA domain-containing protein.
     
 0.906
C5XLV5_SORBI
Uncharacterized protein.
   
 
  0.900
C5YEB8_SORBI
Uncharacterized protein.
     
  0.900
C5XV46_SORBI
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
    
 0.832
C5Z4Z4_SORBI
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
    
 0.832
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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