C5YVK0_SORBI protein (Sorghum bicolor) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

C5YVK0_SORBI

Uncharacterized protein. (458 aa)

Predicted Functional Partners:

C5Y3A0_SORBI

0.511

C5WS01_SORBI

0.508

A0A1Z5RED5

0.507

A0A1Z5R0J6

0.505

C5XNG2_SORBI

0.503

A0A1B6PDG8

0.494

C5WY48_SORBI

0.489

C5YHM2_SORBI

0.479

A0A1B6PLK1

0.472

C5X160_SORBI

0.467

Your Current Organism:

Sorghum bicolor

NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1B6PDG8	A0A1B6PLK1	A0A1B6PDG8	A0A1B6PLK1	Uncharacterized protein.	Uncharacterized protein.	0.510
A0A1B6PDG8	A0A1Z5R0J6	A0A1B6PDG8	A0A1Z5R0J6	Uncharacterized protein.	Uncharacterized protein.	0.468
A0A1B6PDG8	A0A1Z5RED5	A0A1B6PDG8	A0A1Z5RED5	Uncharacterized protein.	Uncharacterized protein.	0.505
A0A1B6PDG8	C5WY48_SORBI	A0A1B6PDG8	C5WY48	Uncharacterized protein.	VQ domain-containing protein.	0.437
A0A1B6PDG8	C5YHM2_SORBI	A0A1B6PDG8	C5YHM2	Uncharacterized protein.	Uncharacterized protein.	0.509
A0A1B6PDG8	C5YVK0_SORBI	A0A1B6PDG8	C5YVK0	Uncharacterized protein.	Uncharacterized protein.	0.494
A0A1B6PLK1	A0A1B6PDG8	A0A1B6PLK1	A0A1B6PDG8	Uncharacterized protein.	Uncharacterized protein.	0.510
A0A1B6PLK1	A0A1Z5R0J6	A0A1B6PLK1	A0A1Z5R0J6	Uncharacterized protein.	Uncharacterized protein.	0.460
A0A1B6PLK1	A0A1Z5RED5	A0A1B6PLK1	A0A1Z5RED5	Uncharacterized protein.	Uncharacterized protein.	0.505
A0A1B6PLK1	C5YHM2_SORBI	A0A1B6PLK1	C5YHM2	Uncharacterized protein.	Uncharacterized protein.	0.440
A0A1B6PLK1	C5YVK0_SORBI	A0A1B6PLK1	C5YVK0	Uncharacterized protein.	Uncharacterized protein.	0.472
A0A1Z5R0J6	A0A1B6PDG8	A0A1Z5R0J6	A0A1B6PDG8	Uncharacterized protein.	Uncharacterized protein.	0.468
A0A1Z5R0J6	A0A1B6PLK1	A0A1Z5R0J6	A0A1B6PLK1	Uncharacterized protein.	Uncharacterized protein.	0.460
A0A1Z5R0J6	C5YHM2_SORBI	A0A1Z5R0J6	C5YHM2	Uncharacterized protein.	Uncharacterized protein.	0.464
A0A1Z5R0J6	C5YVK0_SORBI	A0A1Z5R0J6	C5YVK0	Uncharacterized protein.	Uncharacterized protein.	0.505
A0A1Z5RED5	A0A1B6PDG8	A0A1Z5RED5	A0A1B6PDG8	Uncharacterized protein.	Uncharacterized protein.	0.505
A0A1Z5RED5	A0A1B6PLK1	A0A1Z5RED5	A0A1B6PLK1	Uncharacterized protein.	Uncharacterized protein.	0.505
A0A1Z5RED5	C5WY48_SORBI	A0A1Z5RED5	C5WY48	Uncharacterized protein.	VQ domain-containing protein.	0.405
A0A1Z5RED5	C5X160_SORBI	A0A1Z5RED5	C5X160	Uncharacterized protein.	Uncharacterized protein.	0.418
A0A1Z5RED5	C5YHM2_SORBI	A0A1Z5RED5	C5YHM2	Uncharacterized protein.	Uncharacterized protein.	0.418

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