STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5YYD7_SORBIAminotran_1_2 domain-containing protein. (462 aa)    
Predicted Functional Partners:
C5WNL7_SORBI
Arogenate dehydratase; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine.
 
 
 0.970
C5YFR9_SORBI
Arogenate dehydratase; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine.
 
 
 0.969
C5X5W2_SORBI
Arogenate dehydratase; Converts the prephenate produced from the shikimate- chorismate pathway into phenylalanine.
 
 
 0.965
C5Z447_SORBI
Prephenate/arogenate dehydrogenase domain-containing protein.
   
 0.963
C5Z9D2_SORBI
Prephenate/arogenate dehydrogenase domain-containing protein.
   
 0.959
A0A194YSX5
Aminotran_1_2 domain-containing protein.
   
 0.955
A0A194YNT6
Aspartate aminotransferase.
   
 0.949
C5XKW2_SORBI
Uncharacterized protein.
    
 0.948
A0A1B6Q670
Aspartate aminotransferase.
   
 0.945
C5X3I2_SORBI
Uncharacterized protein.
   
 
 0.942
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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