STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5Z1J0_SORBIPeroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. (332 aa)    
Predicted Functional Partners:
A0A194YNW9
FAD-binding PCMH-type domain-containing protein; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
    
  0.655
A0A194YHT5
PKS_ER domain-containing protein.
     
  0.650
A0A1B6PRX0
FAD-binding PCMH-type domain-containing protein; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
     
  0.650
A0A1W0VRT6
PKS_ER domain-containing protein.
     
  0.650
A0A1Z5R8N9
PKS_ER domain-containing protein.
     
  0.650
CAD
Cinnamyl alcohol dehydrogenase 2.
     
  0.650
C5WW82_SORBI
Uncharacterized protein; Belongs to the cytochrome P450 family.
     
  0.650
C5YC51_SORBI
PKS_ER domain-containing protein.
     
  0.650
C5Z5Y6_SORBI
PKS_ER domain-containing protein.
     
  0.650
C5Z5Y7_SORBI
PKS_ER domain-containing protein.
     
  0.650
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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