STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5Z5G3_SORBIUncharacterized protein. (366 aa)    
Predicted Functional Partners:
C5XH63_SORBI
Uncharacterized protein.
  
  
 
0.902
A0A1Z5R2C4
Uncharacterized protein.
  
  
 
0.901
C5YJ82_SORBI
TPR_REGION domain-containing protein.
   
 0.651
A0A1Z5S661
Uncharacterized protein.
  
   
 0.627
A0A1W0W1Q5
Aa_trans domain-containing protein.
      
 0.581
C5WR74_SORBI
Ornithine aminotransferase.
      
 0.578
A0A1B6PRT5
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
  
  
 0.563
A0A1W0W7D2
RING-type domain-containing protein.
   
 
 0.550
C5XJI2_SORBI
J domain-containing protein.
  
  
 0.545
C5YVI9_SORBI
J domain-containing protein.
  
  
 0.545
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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