STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5Z998_SORBIUncharacterized protein. (720 aa)    
Predicted Functional Partners:
A0A1Z5R1E4
Uncharacterized protein.
    
 
 0.844
C5XL88_SORBI
Uncharacterized protein.
    
 
 0.699
A0A1Z5RDG7
Uncharacterized protein.
  
  0.524
A0A1B6PFJ0
Uncharacterized protein.
  
 
  0.497
A0A1B6Q7H6
Uncharacterized protein.
  
 
  0.490
C5X981_SORBI
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
   
  0.466
A0A1B6P8T8
Uncharacterized protein.
  
 
  0.460
C5WR36_SORBI
Uncharacterized protein.
    
 0.450
A0A1B6P983
Protein kinase domain-containing protein.
  
  0.427
A0A1Z5S5T9
LRRNT_2 domain-containing protein.
  
 
  0.422
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.