STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sb0012s006000Uncharacterized protein. (606 aa)    
Predicted Functional Partners:
A0A1Z5S568
Uncharacterized protein.
   
 
 0.758
A0A1B6QEL0
Uncharacterized protein.
    
 0.601
C5XAH6_SORBI
Uncharacterized protein.
    
 0.601
C5XGP5_SORBI
Uncharacterized protein.
     
 0.594
C5YZZ9_SORBI
Serine/threonine-protein phosphatase.
   
 0.553
C5YP11_SORBI
Uncharacterized protein.
    
 
 0.485
C5Z3F8_SORBI
Uncharacterized protein.
    
 
 0.485
A0A194YT76
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.466
A0A1B6PKM3
Metallophos domain-containing protein.
   
 0.466
A0A1Z5R1P6
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.466
Your Current Organism:
Sorghum bicolor
NCBI taxonomy Id: 4558
Other names: Andropogon sorghum, Andropogon sorghum (L.) Brot., S. bicolor, Sorghum bicolor (L.) Moench, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum nervosum Besser ex Schult., Sorghum saccharatum, Sorghum saccharatum (L.) Moench, Sorghum vulgare, Sorghum vulgare Pers., broomcorn, milo, sorghum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.