STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EchA8_23-hydroxyisobutyryl-CoA hydrolase. (258 aa)    
Predicted Functional Partners:
CaiD
Enoyl-CoA hydratase/carnithine racemase.
 
 
 
0.987
acdA
Short chain-specific acyl CoA dehydrogenase.
 
 0.955
yfcX
Enoyl CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
0.934
fadB
3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family.
0.928
fadA
3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.825
ArcB_4
Sensory histidine-kinase / response regulator.
   
 
 0.825
ArcB_2
Sensory histidine-kinase / response regulator.
   
 
 0.825
BvgS
Sensory box histidine kinase/response regulator.
   
 
 0.825
Ljor_1992
Sensory histidine-kinase / response regulator.
   
 
 0.825
ArcB_1
Sensory histidine-kinase / response regulator.
   
 
 0.825
Your Current Organism:
Legionella jordanis
NCBI taxonomy Id: 456
Other names: ATCC 33623, CCUG 16413, CIP 105268, DSM 19212, L. jordanis, NCTC 11533, strain BL 540, strain BL-540
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