STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ljor_0364Hypothetical protein. (436 aa)    
Predicted Functional Partners:
Ljor_2785
Ankyrin repeats (3 copies).
  
     0.591
Ljor_0483
Leucine-rich repeat protein.
  
     0.570
Ljor_2039
Hypothetical protein.
  
     0.556
Ljor_2730
Hypothetical protein.
  
    0.527
Ljor_1193
Leucine-rich repeat-containing protein (substrate of the Dot/Icm secretion system).
  
     0.503
CzcO
Flavin containing monooxygenae.
  
     0.480
Ljor_2786
Hypothetical protein.
  
     0.480
Ljor_1594
Methyltransferase.
  
     0.479
GudP_1
Major facilitator family transporter.
       0.478
DWF
7-dehydrocholesterol reductase.
  
     0.444
Your Current Organism:
Legionella jordanis
NCBI taxonomy Id: 456
Other names: ATCC 33623, CCUG 16413, CIP 105268, DSM 19212, L. jordanis, NCTC 11533, strain BL 540, strain BL-540
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.