STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ljor_0680Glycosyl hydrolase family 18; Belongs to the glycosyl hydrolase 18 family. (422 aa)    
Predicted Functional Partners:
ChiA
Chitinase domain protein.
   
 0.963
BglX
Glycosyl hydrolase.
   
 
 0.936
YbbD
N-acetyl-beta-glucosaminidase.
   
 
 0.936
Ljor_1982
Glycosyl hydrolase family 81.
 
 
 
 0.921
Ljor_1963
Putative phosphotransferase.
     
  0.900
GbpA
Chitin-binding protein.
 
   
 0.863
Ljor_1421
Cytochrome P450.
 
 
 0.831
CelC
Endoglucanase.
 
   
 0.827
ChiD
Chitinase.
 
  
 0.809
Ljor_2041
Ankyrin repeat-containing protein.
  
 0.802
Your Current Organism:
Legionella jordanis
NCBI taxonomy Id: 456
Other names: ATCC 33623, CCUG 16413, CIP 105268, DSM 19212, L. jordanis, NCTC 11533, strain BL 540, strain BL-540
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.