Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Ljor_0730 | pilM | Ljor_0730 | Ljor_0729 | Hypothetical protein. | Tfp pilus assembly protein, ATPase PilM. | 0.516 |
| Ljor_0730 | pilN | Ljor_0730 | Ljor_0728 | Hypothetical protein. | Tfp pilus assembly protein PilN. | 0.514 |
| Ljor_0730 | pilO | Ljor_0730 | Ljor_0727 | Hypothetical protein. | Tfp pilus assembly protein PilO. | 0.512 |
| Ljor_0730 | pilP | Ljor_0730 | Ljor_0726 | Hypothetical protein. | Tfp pilus assembly protein PilP. | 0.444 |
| Ljor_0730 | pilQ | Ljor_0730 | Ljor_0725 | Hypothetical protein. | Type IV pilus (Tfp) assembly protein PilQ. | 0.504 |
| OutO | lspE | Ljor_1512 | Ljor_0495 | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | 0.891 |
| OutO | pilB | Ljor_1512 | Ljor_1514 | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Pilus assembly protein PilB. | 0.979 |
| OutO | pilE | Ljor_1512 | Ljor_0710 | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | type-IV pilin. | 0.410 |
| OutO | pilM | Ljor_1512 | Ljor_0729 | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Tfp pilus assembly protein, ATPase PilM. | 0.697 |
| OutO | pilN | Ljor_1512 | Ljor_0728 | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Tfp pilus assembly protein PilN. | 0.551 |
| OutO | pilO | Ljor_1512 | Ljor_0727 | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Tfp pilus assembly protein PilO. | 0.529 |
| OutO | pilP | Ljor_1512 | Ljor_0726 | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Tfp pilus assembly protein PilP. | 0.414 |
| OutO | pilQ | Ljor_1512 | Ljor_0725 | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Type IV pilus (Tfp) assembly protein PilQ. | 0.746 |
| lspE | OutO | Ljor_0495 | Ljor_1512 | Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | 0.891 |
| lspE | pilM | Ljor_0495 | Ljor_0729 | Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | Tfp pilus assembly protein, ATPase PilM. | 0.408 |
| lspE | pilN | Ljor_0495 | Ljor_0728 | Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | Tfp pilus assembly protein PilN. | 0.722 |
| lspE | pilO | Ljor_0495 | Ljor_0727 | Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | Tfp pilus assembly protein PilO. | 0.416 |
| lspE | pilQ | Ljor_0495 | Ljor_0725 | Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | Type IV pilus (Tfp) assembly protein PilQ. | 0.680 |
| pilB | OutO | Ljor_1514 | Ljor_1512 | Pilus assembly protein PilB. | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | 0.979 |
| pilB | pilM | Ljor_1514 | Ljor_0729 | Pilus assembly protein PilB. | Tfp pilus assembly protein, ATPase PilM. | 0.538 |
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