STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CynT_1Sulfate transporter. (776 aa)    
Predicted Functional Partners:
IcfA
(beta)-carbonic anhydrase.
 
0.925
CynT_2
Carbonic anhydrase Mig5.
 
 
0.920
nuoM
NADH-quinone oxidoreductase chain M.
  
 
 0.812
petB
Ubiquinol-cytochrome c reductase, cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 
 0.794
TycA
Peptide synthetase, non-ribosomal; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
 0.720
nuoL
NADH-quinone oxidoreductase chain L.
  
  
 0.668
LgrD
Saframycin Mx1 synthetase B.
  
 
 0.626
Ljor_0036
acyl-CoA synthetase.
 
 
 0.577
cysK
Cystathionine beta-synthase.
  
 
 0.570
ArcB_4
Sensory histidine-kinase / response regulator.
  
 
 0.520
Your Current Organism:
Legionella jordanis
NCBI taxonomy Id: 456
Other names: ATCC 33623, CCUG 16413, CIP 105268, DSM 19212, L. jordanis, NCTC 11533, strain BL 540, strain BL-540
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.