STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DmlRTranscriptional regulator; Belongs to the LysR transcriptional regulatory family. (293 aa)    
Predicted Functional Partners:
fadH
2,4-dienoyl-CoA reductase FadH1.
   
 
 0.551
proS
prolyl-tRNA synthase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacy [...]
       0.549
oxyR
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.544
Cph2_3
Regulatory protein (GGDEF and EAL domains).
   
  
 0.441
Gmr_3
GGDEF domain-containing sensory box protein.
   
  
 0.441
epsL
Putative sugar transferase EpsL.
     
 0.440
ArcB_4
Sensory histidine-kinase / response regulator.
   
  
 0.431
ArcB_2
Sensory histidine-kinase / response regulator.
   
  
 0.431
BvgS
Sensory box histidine kinase/response regulator.
   
  
 0.431
Ljor_1992
Sensory histidine-kinase / response regulator.
   
  
 0.431
Your Current Organism:
Legionella jordanis
NCBI taxonomy Id: 456
Other names: ATCC 33623, CCUG 16413, CIP 105268, DSM 19212, L. jordanis, NCTC 11533, strain BL 540, strain BL-540
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.