STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Ljor_1069Viral (Superfamily 1) RNA helicase. (1419 aa)    
Predicted Functional Partners:
Ljor_2463
Interaptin.
 
   0.754
Ljor_0257
TraX protein.
  
     0.702
OsmY_1
Osmotically inducible protein Y.
  
     0.679
Ljor_0879
RasGEF domain protein.
  
     0.673
mutT_1
8-oxo-dGTP diphosphatase.
  
     0.661
Ljor_2293
ABC transporter substrate binding protein.
  
     0.624
Ljor_0593
Putative asmA protein.
 
     0.586
Ljor_2291
Cysteine protease.
  
     0.582
ybhI
Inner membrane protein YbhI.
  
     0.580
Ljor_0670
Thaumatin domain-containing protein.
  
 
   0.564
Your Current Organism:
Legionella jordanis
NCBI taxonomy Id: 456
Other names: ATCC 33623, CCUG 16413, CIP 105268, DSM 19212, L. jordanis, NCTC 11533, strain BL 540, strain BL-540
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.