Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ljor_0244 | Ljor_1140 | Ljor_0244 | Ljor_1140 | O-methyltransferase. | Hypothetical protein. | 0.756 |
Ljor_1139 | Ljor_1140 | Ljor_1139 | Ljor_1140 | Hypothetical protein. | Hypothetical protein. | 0.507 |
Ljor_1139 | mutT_1 | Ljor_1139 | Ljor_1141 | Hypothetical protein. | 8-oxo-dGTP diphosphatase. | 0.412 |
Ljor_1140 | Ljor_0244 | Ljor_1140 | Ljor_0244 | Hypothetical protein. | O-methyltransferase. | 0.756 |
Ljor_1140 | Ljor_1139 | Ljor_1140 | Ljor_1139 | Hypothetical protein. | Hypothetical protein. | 0.507 |
Ljor_1140 | ackA | Ljor_1140 | Ljor_1497 | Hypothetical protein. | Acetate kinase (Acetokinase); Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.438 |
Ljor_1140 | mutT_1 | Ljor_1140 | Ljor_1141 | Hypothetical protein. | 8-oxo-dGTP diphosphatase. | 0.614 |
ackA | Ljor_1140 | Ljor_1497 | Ljor_1140 | Acetate kinase (Acetokinase); Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | Hypothetical protein. | 0.438 |
mutT_1 | Ljor_1139 | Ljor_1141 | Ljor_1139 | 8-oxo-dGTP diphosphatase. | Hypothetical protein. | 0.412 |
mutT_1 | Ljor_1140 | Ljor_1141 | Ljor_1140 | 8-oxo-dGTP diphosphatase. | Hypothetical protein. | 0.614 |